STRINGSTRING
cmoM cmoM AGA87847.1 AGA87847.1 AGA87849.1 AGA87849.1 cmoA cmoA AGA86463.1 AGA86463.1 cmoB cmoB AGA87846.1 AGA87846.1 mnmC mnmC AGA87493.1 AGA87493.1 AGA87850.1 AGA87850.1 AGA86485.1 AGA86485.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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cmoMMethyltransferase family protein; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. (249 aa)    
Predicted Functional Partners:
AGA87847.1
Putative pyrophosphatase; PFAM: MazG nucleotide pyrophosphohydrolase domain.
       0.797
AGA87849.1
Hypothetical protein.
       0.748
cmoA
Methyltransferase, putative; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
 
 
 
 0.720
AGA86463.1
PFAM: Calcineurin-like phosphoesterase.
   
   0.699
cmoB
Methyltransferase, putative; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
 
   
 0.646
AGA87846.1
PFAM: Bacterial regulatory proteins, lacI family; family; TIGRFAM: D-fructose-responsive transcription factor.
     
 0.594
mnmC
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.
  
 
 
 0.586
AGA87493.1
Hypothetical protein; PFAM: YcgL domain.
 
     0.577
AGA87850.1
Hypothetical protein.
       0.577
AGA86485.1
Hypothetical protein.
 
 
 
 0.519
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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