STRINGSTRING
AGA87853.1 AGA87853.1 AGA87382.1 AGA87382.1 AGA87383.1 AGA87383.1 AGA87674.1 AGA87674.1 AGA85692.1 AGA85692.1 AGA85794.1 AGA85794.1 AGA87384.1 AGA87384.1 AGA85701.1 AGA85701.1 AGA87932.1 AGA87932.1 AGA86506.1 AGA86506.1 AGA84954.1 AGA84954.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87853.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
AGA87382.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
     0.748
AGA87383.1
Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334).
  
     0.744
AGA87674.1
Hypothetical protein.
  
     0.726
AGA85692.1
PFAM: Protein of unknown function (DUF721).
  
     0.705
AGA85794.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2131).
  
     0.688
AGA87384.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.686
AGA85701.1
Hypothetical protein.
  
     0.676
AGA87932.1
PFAM: Acyltransferase family.
  
    0.648
AGA86506.1
PFAM: Peptidase inhibitor I78 family.
  
     0.641
AGA84954.1
Putative membrane protein, TIGR01666; PFAM: Fusaric acid resistance protein family; TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical membrane protein, TIGR01666.
  
     0.627
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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