STRINGSTRING
AGA87926.1 AGA87926.1 AGA87925.1 AGA87925.1 AGA87996.1 AGA87996.1 AGA87923.1 AGA87923.1 AGA85752.1 AGA85752.1 AGA87924.1 AGA87924.1 AGA87210.1 AGA87210.1 AGA84909.1 AGA84909.1 AGA85098.1 AGA85098.1 AGA87229.1 AGA87229.1 AGA86185.1 AGA86185.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA87926.1PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (261 aa)    
Predicted Functional Partners:
AGA87925.1
PFAM: Domain of unknown function (DUF1987).
 
   0.859
AGA87996.1
EAL domain-containing protein; PFAM: EAL domain.
  
 0.833
AGA87923.1
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
    0.825
AGA85752.1
EAL domain-containing protein; PFAM: EAL domain; GAF domain.
  
 0.816
AGA87924.1
Hypothetical protein.
 
    0.788
AGA87210.1
PFAM: HD domain; Response regulator receiver domain.
 
  
 0.753
AGA84909.1
PFAM: Response regulator receiver domain.
 
 
    0.750
AGA85098.1
PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 
 0.715
AGA87229.1
HD-GYP domain-containing protein; PFAM: Domain of unknown function (DUF3391); HD domain.
 
 0.651
AGA86185.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain.
 
 0.593
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.