STRINGSTRING
AGA88060.1 AGA88060.1 AGA86766.1 AGA86766.1 AGA87059.1 AGA87059.1 AGA87047.1 AGA87047.1 AGA87050.1 AGA87050.1 AGA85785.1 AGA85785.1 AGA86374.1 AGA86374.1 AGA87046.1 AGA87046.1 AGA87049.1 AGA87049.1 arcA arcA AGA86833.1 AGA86833.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA88060.1Outer membrane protein W; PFAM: OmpW family. (225 aa)    
Predicted Functional Partners:
AGA86766.1
Oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.860
AGA87059.1
Oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.859
AGA87047.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
    0.777
AGA87050.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
    0.777
AGA85785.1
Hypothetical protein; PFAM: Polyphosphate kinase 2 (PPK2).
   
    0.735
AGA86374.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase.
   
    0.735
AGA87046.1
PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.707
AGA87049.1
PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.707
arcA
Arginine deiminase; PFAM: Amidinotransferase; TIGRFAM: arginine deiminase.
   
    0.632
AGA86833.1
PFAM: Universal stress protein family.
 
  
 0.631
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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