STRINGSTRING
AGA88114.1 AGA88114.1 anmK anmK AGA86604.1 AGA86604.1 AGA85278.1 AGA85278.1 AGA88776.1 AGA88776.1 tyrS tyrS AGA88050.1 AGA88050.1 AGA87312.1 AGA87312.1 AGA87590.1 AGA87590.1 AGA88197.1 AGA88197.1 rlpA rlpA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AGA88114.1Metalloendopeptidase-like membrane protein; PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23. (469 aa)    
Predicted Functional Partners:
anmK
Molecular chaperone; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
    0.882
AGA86604.1
LysM repeat-containing protein; PFAM: Transglycosylase SLT domain; MLTD_N; LysM domain.
 
  
 0.656
AGA85278.1
PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain.
 
  
 0.653
AGA88776.1
ABC-type Zn2+ transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.
  
  
 0.651
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
       0.603
AGA88050.1
PFAM: Protein of unknown function (DUF2796).
  
  
 0.601
AGA87312.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23; LysM domain; manually curated.
 
   
0.594
AGA87590.1
PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
 
  
 0.573
AGA88197.1
Penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family.
 
   
 0.552
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.525
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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