STRINGSTRING
AGA88119.1 AGA88119.1 AGA87679.1 AGA87679.1 AGA87678.1 AGA87678.1 AGA87676.1 AGA87676.1 AGA87677.1 AGA87677.1 AGA88118.1 AGA88118.1 AGA85310.1 AGA85310.1 AGA85099.1 AGA85099.1 AGA85682.1 AGA85682.1 AGA88284.1 AGA88284.1 AGA86550.1 AGA86550.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88119.1Putative membrane protein; PFAM: Protein of unknown function (DUF805). (318 aa)    
Predicted Functional Partners:
AGA87679.1
Hypothetical protein.
 
     0.690
AGA87678.1
Hypothetical protein.
 
     0.678
AGA87676.1
Putative membrane protein/domain protein; PFAM: RDD family.
 
    0.655
AGA87677.1
PFAM: Integral membrane protein DUF95.
 
    0.621
AGA88118.1
PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein.
       0.545
AGA85310.1
PFAM: Protein of unknown function (DUF1631).
  
     0.537
AGA85099.1
Hypothetical protein.
  
     0.534
AGA85682.1
Putative Fe-S oxidoreductase; PFAM: Uncharacterised protein family (UPF0153).
  
     0.484
AGA88284.1
Hypothetical protein.
  
     0.440
AGA86550.1
Hypothetical protein.
 
     0.438
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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