STRINGSTRING
AGA88150.1 AGA88150.1 AGA88152.1 AGA88152.1 AGA88151.1 AGA88151.1 AGA86500.1 AGA86500.1 glgA glgA AGA88457.1 AGA88457.1 AGA88782.1 AGA88782.1 AGA84644.1 AGA84644.1 AGA86046.1 AGA86046.1 AGA87741.1 AGA87741.1 AGA88343.1 AGA88343.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88150.1PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain. (640 aa)    
Predicted Functional Partners:
AGA88152.1
PFAM: SpoVR like protein.
 
  
 0.989
AGA88151.1
PFAM: Protein of unknown function (DUF444); Belongs to the UPF0229 family.
 
  
 0.988
AGA86500.1
PFAM: Bacterial protein of unknown function (DUF883).
   
    0.819
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.783
AGA88457.1
PFAM: Aldo/keto reductase family.
   
    0.774
AGA88782.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.742
AGA84644.1
PFAM: Bacterial protein of unknown function (DUF883).
   
    0.738
AGA86046.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
   
    0.732
AGA87741.1
PFAM: SmpA / OmlA family.
   
    0.685
AGA88343.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1508).
   
    0.654
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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