STRINGSTRING
AGA88152.1 AGA88152.1 AGA88151.1 AGA88151.1 AGA88150.1 AGA88150.1 AGA88343.1 AGA88343.1 AGA86500.1 AGA86500.1 AGA88005.1 AGA88005.1 AGA88427.1 AGA88427.1 cca cca AGA87533.1 AGA87533.1 AGA87534.1 AGA87534.1 AGA84807.1 AGA84807.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88152.1PFAM: SpoVR like protein. (515 aa)    
Predicted Functional Partners:
AGA88151.1
PFAM: Protein of unknown function (DUF444); Belongs to the UPF0229 family.
 
  
 0.993
AGA88150.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
 
  
 0.989
AGA88343.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1508).
   
  
 0.785
AGA86500.1
PFAM: Bacterial protein of unknown function (DUF883).
   
    0.704
AGA88005.1
PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.644
AGA88427.1
Bacterial lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
   
    0.595
cca
tRNA nucleotidyltransferase/poly(A) polymerase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 2 subfamily.
       0.581
AGA87533.1
PFAM: Protein of unknown function (DUF1282).
   
    0.568
AGA87534.1
PFAM: Yip1 domain.
   
    0.568
AGA84807.1
Putative membrane protein required for spore maturation; PFAM: Nucleoside recognition.
  
  
 0.479
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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