STRINGSTRING
AGA88229.1 AGA88229.1 AGA88228.1 AGA88228.1 argH argH AGA88230.1 AGA88230.1 AGA88226.1 AGA88226.1 AGA88225.1 AGA88225.1 AGA88231.1 AGA88231.1 guaA guaA AGA88232.1 AGA88232.1 AGA86109.1 AGA86109.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88229.1PFAM: Acetyltransferase (GNAT) family. (159 aa)    
Predicted Functional Partners:
AGA88228.1
Hypothetical protein.
       0.709
argH
PFAM: Lyase; TIGRFAM: argininosuccinate lyase.
     
 0.682
AGA88230.1
Uncharacterized protein involved in response to NO; PFAM: NnrS protein.
       0.636
AGA88226.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase.
       0.463
AGA88225.1
Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
       0.460
AGA88231.1
Hypothetical protein.
       0.449
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.429
AGA88232.1
Hypothetical protein.
       0.418
AGA86109.1
PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ.
  
 
 0.416
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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