Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA88275.1 | AGA88276.1 | Psest_3800 | Psest_3801 | PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | 0.574 |
AGA88275.1 | AGA88277.1 | Psest_3800 | Psest_3802 | PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. | Hypothetical protein. | 0.565 |
AGA88275.1 | AGA88705.1 | Psest_3800 | Psest_4235 | PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. | PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.937 |
AGA88276.1 | AGA88275.1 | Psest_3801 | Psest_3800 | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. | 0.574 |
AGA88276.1 | AGA88277.1 | Psest_3801 | Psest_3802 | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | Hypothetical protein. | 0.892 |
AGA88276.1 | AGA88699.1 | Psest_3801 | Psest_4229 | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | Transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator. | 0.561 |
AGA88276.1 | AGA88705.1 | Psest_3801 | Psest_4235 | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.402 |
AGA88276.1 | plsX | Psest_3801 | Psest_1686 | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | Phosphate:acyl-(acyl carrier protein) acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.432 |
AGA88277.1 | AGA88275.1 | Psest_3802 | Psest_3800 | Hypothetical protein. | PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. | 0.565 |
AGA88277.1 | AGA88276.1 | Psest_3802 | Psest_3801 | Hypothetical protein. | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | 0.892 |
AGA88699.1 | AGA88276.1 | Psest_4229 | Psest_3801 | Transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator. | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | 0.561 |
AGA88705.1 | AGA88275.1 | Psest_4235 | Psest_3800 | PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family. | PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. | 0.937 |
AGA88705.1 | AGA88276.1 | Psest_4235 | Psest_3801 | PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family. | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | 0.402 |
plsX | AGA88276.1 | Psest_1686 | Psest_3801 | Phosphate:acyl-(acyl carrier protein) acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | Hypothetical protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1. | 0.432 |