STRINGSTRING
AGA88294.1 AGA88294.1 AGA88295.1 AGA88295.1 AGA87618.1 AGA87618.1 tolB tolB AGA88626.1 AGA88626.1 AGA87338.1 AGA87338.1 AGA86105.1 AGA86105.1 AGA85376.1 AGA85376.1 AGA88714.1 AGA88714.1 AGA86695.1 AGA86695.1 lolA lolA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGA88294.1Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family. (190 aa)    
Predicted Functional Partners:
AGA88295.1
PFAM: FecR protein.
 
     0.920
AGA87618.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
  
  
  0.912
tolB
Tol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.640
AGA88626.1
DNA-binding protein with winged-HTH domain; PFAM: Transcriptional regulatory protein, C terminal.
  
 
 0.555
AGA87338.1
PFAM: Outer membrane protein (OmpH-like).
  
 
 0.537
AGA86105.1
Hypothetical protein.
 
 
 0.475
AGA85376.1
PAS domain S-box; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.467
AGA88714.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family.
 
 
 0.439
AGA86695.1
Metal-dependent hydrolase; PFAM: Endonuclease/Exonuclease/phosphatase family.
  
  
 0.426
lolA
Periplasmic chaperone LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
 
 0.417
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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