STRINGSTRING
AGA88299.1 AGA88299.1 AGA88300.1 AGA88300.1 AGA88301.1 AGA88301.1 AGA88535.1 AGA88535.1 AGA88302.1 AGA88302.1 AGA85356.1 AGA85356.1 AGA87853.1 AGA87853.1 AGA87382.1 AGA87382.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88299.1Putative membrane protein; PFAM: Domain of unknown function (DUF477). (205 aa)    
Predicted Functional Partners:
AGA88300.1
Beta-propeller domain-containing protein, methanol dehydrogenase; PFAM: Domain of unknown function (DUF477).
 
     0.940
AGA88301.1
Hypothetical protein; PFAM: LemA family.
 
     0.926
AGA88535.1
PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4.
 
     0.582
AGA88302.1
PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
       0.517
AGA85356.1
Putative membrane protein.
  
     0.503
AGA87853.1
Hypothetical protein.
  
     0.493
AGA87382.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
     0.431
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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