STRINGSTRING
AGA88307.1 AGA88307.1 AGA87236.1 AGA87236.1 AGA88309.1 AGA88309.1 AGA87477.1 AGA87477.1 AGA87724.1 AGA87724.1 AGA87692.1 AGA87692.1 AGA84971.1 AGA84971.1 AGA84857.1 AGA84857.1 AGA88758.1 AGA88758.1 AGA85620.1 AGA85620.1 AGA85618.1 AGA85618.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88307.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
AGA87236.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
     0.712
AGA88309.1
NAD(P)H-nitrite reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Belongs to the FAD-dependent oxidoreductase family.
 
     0.645
AGA87477.1
Putative glycosyltransferase; PFAM: PilZ domain.
  
     0.629
AGA87724.1
Hypothetical protein.
  
     0.625
AGA87692.1
Hypothetical protein.
 
     0.612
AGA84971.1
Putative permease, DMT superfamily; PFAM: EamA-like transporter family.
  
     0.606
AGA84857.1
Hypothetical protein.
  
     0.603
AGA88758.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.592
AGA85620.1
Hypothetical protein.
  
     0.560
AGA85618.1
Hypothetical protein.
  
     0.548
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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