Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA85323.1 | AGA86393.1 | Psest_0730 | Psest_1847 | PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase. | PFAM: Universal stress protein family. | 0.403 |
AGA85323.1 | AGA88326.1 | Psest_0730 | Psest_3851 | PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase. | PFAM: Universal stress protein family. | 0.403 |
AGA86393.1 | AGA85323.1 | Psest_1847 | Psest_0730 | PFAM: Universal stress protein family. | PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase. | 0.403 |
AGA86393.1 | AGA88326.1 | Psest_1847 | Psest_3851 | PFAM: Universal stress protein family. | PFAM: Universal stress protein family. | 0.578 |
AGA86836.1 | AGA88326.1 | Psest_2310 | Psest_3851 | Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OprF membrane domain; OmpA family. | PFAM: Universal stress protein family. | 0.467 |
AGA88325.1 | AGA88326.1 | Psest_3850 | Psest_3851 | Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain. | PFAM: Universal stress protein family. | 0.515 |
AGA88326.1 | AGA85323.1 | Psest_3851 | Psest_0730 | PFAM: Universal stress protein family. | PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase. | 0.403 |
AGA88326.1 | AGA86393.1 | Psest_3851 | Psest_1847 | PFAM: Universal stress protein family. | PFAM: Universal stress protein family. | 0.578 |
AGA88326.1 | AGA86836.1 | Psest_3851 | Psest_2310 | PFAM: Universal stress protein family. | Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OprF membrane domain; OmpA family. | 0.467 |
AGA88326.1 | AGA88325.1 | Psest_3851 | Psest_3850 | PFAM: Universal stress protein family. | Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain. | 0.515 |