STRINGSTRING
AGA88326.1 AGA88326.1 AGA86393.1 AGA86393.1 AGA88325.1 AGA88325.1 AGA86836.1 AGA86836.1 AGA85323.1 AGA85323.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88326.1PFAM: Universal stress protein family. (270 aa)    
Predicted Functional Partners:
AGA86393.1
PFAM: Universal stress protein family.
  
  
 0.578
AGA88325.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.
  
    0.515
AGA86836.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OprF membrane domain; OmpA family.
 
  
 0.467
AGA85323.1
PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase.
  
    0.403
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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