STRINGSTRING
AGA88344.1 AGA88344.1 AGA87951.1 AGA87951.1 AGA87952.1 AGA87952.1 AGA85064.1 AGA85064.1 AGA85065.1 AGA85065.1 AGA85061.1 AGA85061.1 AGA85063.1 AGA85063.1 AGA87949.1 AGA87949.1 AGA85060.1 AGA85060.1 AGA88345.1 AGA88345.1 AGA85076.1 AGA85076.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGA88344.1Hypothetical protein; PFAM: SdiA-regulated. (298 aa)    
Predicted Functional Partners:
AGA87951.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
 
     0.768
AGA87952.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
   
 0.756
AGA85064.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
 
     0.753
AGA85065.1
Mn2+-dependent serine/threonine protein kinase; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.753
AGA85061.1
Lipopolysaccharide kinase (Kdo/WaaP) family; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
     0.744
AGA85063.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.726
AGA87949.1
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily; PFAM: Sulfatase.
  
     0.725
AGA85060.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.698
AGA88345.1
Hypothetical protein; PFAM: SdiA-regulated.
 
    
0.681
AGA85076.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
  
     0.654
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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