STRINGSTRING
AGA88483.1 AGA88483.1 AGA88484.1 AGA88484.1 AGA88482.1 AGA88482.1 AGA87744.1 AGA87744.1 AGA86105.1 AGA86105.1 AGA85809.1 AGA85809.1 AGA87595.1 AGA87595.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88483.1Conserverd hypothetical protein; PFAM: Protein of unknown function (DUF2388); TIGRFAM: conserverd hypothetical protein. (102 aa)    
Predicted Functional Partners:
AGA88484.1
PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily.
  
    0.653
AGA88482.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
       0.578
AGA87744.1
Bacterioferritin (cytochrome b1); PFAM: Ferritin-like domain.
   
    0.568
AGA86105.1
Hypothetical protein.
   
    0.551
AGA85809.1
Putative outer membrane lipoprotein; PFAM: Rickettsia 17 kDa surface antigen.
   
    0.525
AGA87595.1
Negative regulator of sigma E activity; PFAM: Anti sigma-E protein RseA, C-terminal domain; Anti sigma-E protein RseA, N-terminal domain.
   
    0.506
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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