STRINGSTRING
AGA88552.1 AGA88552.1 AGA88553.1 AGA88553.1 AGA88246.1 AGA88246.1 AGA87295.1 AGA87295.1 AGA88247.1 AGA88247.1 AGA88405.1 AGA88405.1 argA argA argB argB glnD glnD glsA glsA AGA85675.1 AGA85675.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
AGA88552.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
AGA88553.1
Putative permease; PFAM: Domain of unknown function (DUF897).
 
 
 
 0.979
AGA88246.1
PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; TC 1.A.11.
 
 
 0.920
AGA87295.1
Ammonia permease; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.
  
 
 0.908
AGA88247.1
PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11.
  
 
 0.908
AGA88405.1
Signal transduction histidine kinase, nitrogen specific; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold.
  
 
 0.788
argA
N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase.
   
 
 0.755
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.723
glnD
(protein-PII) uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
   
 
 0.665
glsA
L-glutaminase; PFAM: Glutaminase; TIGRFAM: glutaminase A; Belongs to the glutaminase family.
 
     0.665
AGA85675.1
Flp pilus assembly protein TadD; PFAM: Coatomer epsilon subunit.
    
 
 0.653
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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