Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA86348.1 | AGA87849.1 | Psest_1802 | Psest_3359 | PFAM: Spermine/spermidine synthase. | Hypothetical protein. | 0.445 |
AGA86348.1 | AGA88570.1 | Psest_1802 | Psest_4100 | PFAM: Spermine/spermidine synthase. | Hypothetical protein; PFAM: Tim44-like domain. | 0.538 |
AGA87266.1 | AGA87853.1 | Psest_2760 | Psest_3363 | Hypothetical protein. | Hypothetical protein. | 0.433 |
AGA87266.1 | AGA88570.1 | Psest_2760 | Psest_4100 | Hypothetical protein. | Hypothetical protein; PFAM: Tim44-like domain. | 0.431 |
AGA87383.1 | AGA87849.1 | Psest_2879 | Psest_3359 | Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334). | Hypothetical protein. | 0.619 |
AGA87383.1 | AGA87853.1 | Psest_2879 | Psest_3363 | Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334). | Hypothetical protein. | 0.744 |
AGA87383.1 | AGA88570.1 | Psest_2879 | Psest_4100 | Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334). | Hypothetical protein; PFAM: Tim44-like domain. | 0.453 |
AGA87810.1 | AGA88570.1 | Psest_3319 | Psest_4100 | PFAM: Protein of unknown function (DUF615); Belongs to the UPF0307 family. | Hypothetical protein; PFAM: Tim44-like domain. | 0.529 |
AGA87849.1 | AGA86348.1 | Psest_3359 | Psest_1802 | Hypothetical protein. | PFAM: Spermine/spermidine synthase. | 0.445 |
AGA87849.1 | AGA87383.1 | Psest_3359 | Psest_2879 | Hypothetical protein. | Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334). | 0.619 |
AGA87849.1 | AGA87853.1 | Psest_3359 | Psest_3363 | Hypothetical protein. | Hypothetical protein. | 0.609 |
AGA87849.1 | AGA88570.1 | Psest_3359 | Psest_4100 | Hypothetical protein. | Hypothetical protein; PFAM: Tim44-like domain. | 0.497 |
AGA87853.1 | AGA87266.1 | Psest_3363 | Psest_2760 | Hypothetical protein. | Hypothetical protein. | 0.433 |
AGA87853.1 | AGA87383.1 | Psest_3363 | Psest_2879 | Hypothetical protein. | Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334). | 0.744 |
AGA87853.1 | AGA87849.1 | Psest_3363 | Psest_3359 | Hypothetical protein. | Hypothetical protein. | 0.609 |
AGA87853.1 | AGA88570.1 | Psest_3363 | Psest_4100 | Hypothetical protein. | Hypothetical protein; PFAM: Tim44-like domain. | 0.444 |
AGA88568.1 | AGA88569.1 | Psest_4098 | Psest_4099 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.640 |
AGA88568.1 | AGA88570.1 | Psest_4098 | Psest_4100 | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | Hypothetical protein; PFAM: Tim44-like domain. | 0.434 |
AGA88569.1 | AGA88568.1 | Psest_4099 | Psest_4098 | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II. | 0.640 |
AGA88569.1 | AGA88570.1 | Psest_4099 | Psest_4100 | TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | Hypothetical protein; PFAM: Tim44-like domain. | 0.506 |
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