STRINGSTRING
AGA88605.1 AGA88605.1 AGA88604.1 AGA88604.1 AGA88603.1 AGA88603.1 AGA88607.1 AGA88607.1 AGA84859.1 AGA84859.1 AGA84864.1 AGA84864.1 AGA88606.1 AGA88606.1 AGA88608.1 AGA88608.1 AGA88018.1 AGA88018.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88605.1Ketosteroid isomerase-like enzyme; PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein. (152 aa)    
Predicted Functional Partners:
AGA88604.1
Hypothetical protein; PFAM: YCII-related domain.
 
     0.755
AGA88603.1
RNA polymerase, sigma subunit, ECF family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
 
     0.728
AGA88607.1
Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix.
       0.420
AGA84859.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.416
AGA84864.1
Putative hydrolase of the alpha/beta-hydrolase fold protein; PFAM: alpha/beta hydrolase fold.
  
    0.416
AGA88606.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor.
       0.411
AGA88608.1
Hypothetical protein.
       0.411
AGA88018.1
PFAM: Bacterial protein of unknown function (DUF899).
 
     0.406
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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