Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA84991.1 | AGA84992.1 | Psest_0380 | Psest_0381 | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | Hypothetical protein. | 0.860 |
AGA84991.1 | AGA88607.1 | Psest_0380 | Psest_4137 | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.438 |
AGA84991.1 | AGA88805.1 | Psest_0380 | Psest_4336 | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.511 |
AGA84992.1 | AGA84991.1 | Psest_0381 | Psest_0380 | Hypothetical protein. | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | 0.860 |
AGA84992.1 | AGA87395.1 | Psest_0381 | Psest_2891 | Hypothetical protein. | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | 0.492 |
AGA84992.1 | AGA88606.1 | Psest_0381 | Psest_4136 | Hypothetical protein. | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. | 0.555 |
AGA84992.1 | AGA88607.1 | Psest_0381 | Psest_4137 | Hypothetical protein. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.483 |
AGA84992.1 | AGA88806.1 | Psest_0381 | Psest_4337 | Hypothetical protein. | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor. | 0.423 |
AGA86650.1 | AGA88607.1 | Psest_2116 | Psest_4137 | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.515 |
AGA86650.1 | AGA88805.1 | Psest_2116 | Psest_4336 | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.587 |
AGA87395.1 | AGA84992.1 | Psest_2891 | Psest_0381 | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | Hypothetical protein. | 0.492 |
AGA87395.1 | AGA88607.1 | Psest_2891 | Psest_4137 | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.452 |
AGA87395.1 | AGA88805.1 | Psest_2891 | Psest_4336 | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.469 |
AGA87395.1 | AGA88806.1 | Psest_2891 | Psest_4337 | PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor. | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor. | 0.412 |
AGA87837.1 | AGA88607.1 | Psest_3347 | Psest_4137 | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.462 |
AGA88605.1 | AGA88606.1 | Psest_4135 | Psest_4136 | Ketosteroid isomerase-like enzyme; PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein. | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. | 0.411 |
AGA88605.1 | AGA88607.1 | Psest_4135 | Psest_4137 | Ketosteroid isomerase-like enzyme; PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein. | Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. | 0.420 |
AGA88605.1 | AGA88608.1 | Psest_4135 | Psest_4138 | Ketosteroid isomerase-like enzyme; PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein. | Hypothetical protein. | 0.411 |
AGA88606.1 | AGA84992.1 | Psest_4136 | Psest_0381 | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. | Hypothetical protein. | 0.555 |
AGA88606.1 | AGA88605.1 | Psest_4136 | Psest_4135 | PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. | Ketosteroid isomerase-like enzyme; PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein. | 0.411 |
page 1 of 3