STRINGSTRING
AGA88663.1 AGA88663.1 AGA88139.1 AGA88139.1 AGA85590.1 AGA85590.1 AGA86306.1 AGA86306.1 AGA84779.1 AGA84779.1 AGA88325.1 AGA88325.1 recG recG AGA86297.1 AGA86297.1 AGA86639.1 AGA86639.1 AGA85102.1 AGA85102.1 AGA87618.1 AGA87618.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
AGA88663.1Putative signal transduction protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; HDOD domain. (467 aa)    
Predicted Functional Partners:
AGA88139.1
PFAM: Protein of unknown function (DUF3530).
  
     0.739
AGA85590.1
PFAM: Protein of unknown function (DUF3426); TIGRFAM: MJ0042 family finger-like domain.
  
     0.716
AGA86306.1
Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
  
     0.681
AGA84779.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.675
AGA88325.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.
  
    0.660
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
 0.641
AGA86297.1
PFAM: CheW-like domain.
 
     0.638
AGA86639.1
PFAM: Response regulator receiver domain.
 
 
   0.638
AGA85102.1
HDOD domain-containing protein; PFAM: HDOD domain.
  
     0.631
AGA87618.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
 
    0.625
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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