STRINGSTRING
AGA88727.1 AGA88727.1 AGA88726.1 AGA88726.1 AGA88725.1 AGA88725.1 AGA88724.1 AGA88724.1 AGA88728.1 AGA88728.1 AGA88730.1 AGA88730.1 AGA87470.1 AGA87470.1 AGA88622.1 AGA88622.1 AGA88729.1 AGA88729.1 AGA88723.1 AGA88723.1 AGA84779.1 AGA84779.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88727.1ABC-type uncharacterized transport system, auxiliary component; PFAM: Protein of unknown function (DUF330). (207 aa)    
Predicted Functional Partners:
AGA88726.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
 
   0.968
AGA88725.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
    0.958
AGA88724.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; manually curated.
 
  
 0.948
AGA88728.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
       0.532
AGA88730.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
       0.532
AGA87470.1
Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.515
AGA88622.1
Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC.
    
   0.515
AGA88729.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; ABC-2 type transporter.
       0.514
AGA88723.1
PFAM: Catalase.
       0.480
AGA84779.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.476
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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