STRINGSTRING
AGA88790.1 AGA88790.1 AGA88789.1 AGA88789.1 AGA88791.1 AGA88791.1 AGA86166.1 AGA86166.1 AGA87217.1 AGA87217.1 AGA86463.1 AGA86463.1 AGA87674.1 AGA87674.1 AGA86032.1 AGA86032.1 AGA86987.1 AGA86987.1 AGA87595.1 AGA87595.1 AGA86414.1 AGA86414.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88790.1PFAM: Probable metal-binding protein (DUF2387); TIGRFAM: conserved hypothetical metal-binding protein. (92 aa)    
Predicted Functional Partners:
AGA88789.1
Zn-dependent oligopeptidase; PFAM: Peptidase family M3.
       0.797
AGA88791.1
PFAM: Domain of unknown function (DUF1835); Protein of unknown function.
       0.797
AGA86166.1
Hypothetical protein.
  
    0.766
AGA87217.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.758
AGA86463.1
PFAM: Calcineurin-like phosphoesterase.
  
     0.753
AGA87674.1
Hypothetical protein.
  
     0.752
AGA86032.1
PFAM: Predicted membrane protein (DUF2069).
  
     0.746
AGA86987.1
Hypothetical protein.
  
     0.724
AGA87595.1
Negative regulator of sigma E activity; PFAM: Anti sigma-E protein RseA, C-terminal domain; Anti sigma-E protein RseA, N-terminal domain.
  
     0.719
AGA86414.1
PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein; Belongs to the UPF0149 family.
  
     0.707
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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