STRINGSTRING
AGA88791.1 AGA88791.1 AGA88789.1 AGA88789.1 AGA88790.1 AGA88790.1 AGA86499.1 AGA86499.1 AGA85068.1 AGA85068.1 AGA85987.1 AGA85987.1 AGA87063.1 AGA87063.1 AGA88788.1 AGA88788.1 AGA85371.1 AGA85371.1 AGA86500.1 AGA86500.1 AGA85397.1 AGA85397.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88791.1PFAM: Domain of unknown function (DUF1835); Protein of unknown function. (258 aa)    
Predicted Functional Partners:
AGA88789.1
Zn-dependent oligopeptidase; PFAM: Peptidase family M3.
       0.797
AGA88790.1
PFAM: Probable metal-binding protein (DUF2387); TIGRFAM: conserved hypothetical metal-binding protein.
       0.797
AGA86499.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1469).
  
     0.716
AGA85068.1
PFAM: Glycosyltransferase family 25 (LPS biosynthesis protein).
  
     0.693
AGA85987.1
Hypothetical protein.
  
     0.685
AGA87063.1
Periplasmic component of amino acid ABC-type transporter/signal transduction system; PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
     0.626
AGA88788.1
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase.
       0.504
AGA85371.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH).
  
     0.481
AGA86500.1
PFAM: Bacterial protein of unknown function (DUF883).
  
     0.469
AGA85397.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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