STRINGSTRING
AGA88837.1 AGA88837.1 AGA88840.1 AGA88840.1 AGA88838.1 AGA88838.1 AGA88836.1 AGA88836.1 AGA88839.1 AGA88839.1 AGA87355.1 AGA87355.1 AGA88834.1 AGA88834.1 AGA88835.1 AGA88835.1 AGA87354.1 AGA87354.1 AGA87352.1 AGA87352.1 AGA87350.1 AGA87350.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Coexpression
Experiments
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[Homology]
Score
AGA88837.1Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N. (506 aa)    
Predicted Functional Partners:
AGA88840.1
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains.
 
 
0.996
AGA88838.1
Multisubunit Na+/H+ antiporter, MnhC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
 
 
 0.989
AGA88836.1
Multisubunit Na+/H+ antiporter, MnhE subunit; PFAM: Na+/H+ ion antiporter subunit.
 
 
 0.987
AGA88839.1
PFAM: Domain related to MnhB subunit of Na+/H+ antiporter.
 
 0.986
AGA87355.1
PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: monovalent cation:proton antiporter.
 
 
0.985
AGA88834.1
PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.985
AGA88835.1
Multisubunit Na+/H+ antiporter, MnhF subunit; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF).
 
 
 0.982
AGA87354.1
Multisubunit Na+/H+ antiporter, MnhC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
 
 
 0.955
AGA87352.1
Multisubunit Na+/H+ antiporter, MnhE subunit; PFAM: Na+/H+ ion antiporter subunit.
 
 
 0.947
AGA87350.1
PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1.1.
 
 
 0.937
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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