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Psyr_0028 Psyr_0028 Psyr_4710 Psyr_4710 Psyr_4711 Psyr_4711 Psyr_4831 Psyr_4831 Psyr_4830 Psyr_4830 Psyr_3758 Psyr_3758 Psyr_0029 Psyr_0029 pncB pncB betI betI Psyr_3778 Psyr_3778 Psyr_4775 Psyr_4775
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0028Substrate-binding region of ABC-type glycine betaine transport system. (308 aa)    
Predicted Functional Partners:
Psyr_4710
Binding-protein-dependent transport systems inner membrane component.
 
 0.989
Psyr_4711
Glycine betaine/L-proline transport ATP-binding subunit.
 
 0.984
Psyr_4831
ABC transporter.
 
 0.982
Psyr_4830
Binding-protein-dependent transport systems inner membrane component.
 
 0.980
Psyr_3758
Substrate-binding region of ABC-type glycine betaine transport system.
 
 
0.756
Psyr_0029
Sulfatase.
 
     0.731
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
      
 0.689
betI
Transcriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity).
 
     0.543
Psyr_3778
Substrate-binding region of ABC-type glycine betaine transport system.
  
  
  0.499
Psyr_4775
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region.
  
  
 0.484
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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