STRINGSTRING
Psyr_0029 Psyr_0029 Psyr_0028 Psyr_0028 Psyr_2646 Psyr_2646 Psyr_4738 Psyr_4738 Psyr_0030 Psyr_0030 Psyr_0006 Psyr_0006 Psyr_2524 Psyr_2524 Psyr_0145 Psyr_0145 Psyr_3985 Psyr_3985 cysN cysN Psyr_0104 Psyr_0104
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0029Sulfatase. (501 aa)    
Predicted Functional Partners:
Psyr_0028
Substrate-binding region of ABC-type glycine betaine transport system.
 
     0.731
Psyr_2646
Radical SAM.
  
 
 0.717
Psyr_4738
Conserved hypothetical protein.
 
     0.668
Psyr_0030
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.631
Psyr_0006
Putative phenylacetaldoxime dehydratase.
  
     0.593
Psyr_2524
Conserved hypothetical protein.
  
     0.588
Psyr_0145
Conserved hypothetical protein.
  
    0.587
Psyr_3985
Pectate lyase/Amb allergen.
  
     0.582
cysN
Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.535
Psyr_0104
Hypothetical protein.
  
   0.530
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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