STRINGSTRING
Psyr_0030 Psyr_0030 Psyr_2671 Psyr_2671 Psyr_3236 Psyr_3236 Psyr_1800 Psyr_1800 Psyr_2929 Psyr_2929 Psyr_1478 Psyr_1478 Psyr_3048 Psyr_3048 Psyr_3312 Psyr_3312 Psyr_3526 Psyr_3526 Psyr_0909 Psyr_0909 Psyr_2480 Psyr_2480
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0030Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (316 aa)    
Predicted Functional Partners:
Psyr_2671
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.765
Psyr_3236
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.735
Psyr_1800
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.724
Psyr_2929
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.721
Psyr_1478
Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
     0.719
Psyr_3048
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.718
Psyr_3312
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.718
Psyr_3526
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.703
Psyr_0909
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.697
Psyr_2480
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.693
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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