STRINGSTRING
Psyr_0037 Psyr_0037 Psyr_0036 Psyr_0036 Psyr_0038 Psyr_0038 Psyr_4173 Psyr_4173 Psyr_3782 Psyr_3782 Psyr_4448 Psyr_4448 Psyr_4449 Psyr_4449
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0037Protein of unknown function DUF1458. (71 aa)    
Predicted Functional Partners:
Psyr_0036
Protein of unknown function DUF883.
  
    0.581
Psyr_0038
Protein of unknown function DUF1161.
  
    0.521
Psyr_4173
Protein of unknown function DUF748.
  
    0.502
Psyr_3782
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
   
    0.493
Psyr_4448
Ferritin and Dps.
   
    0.404
Psyr_4449
AsmA.
   
    0.404
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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