STRINGSTRING
Psyr_0265 Psyr_0265 Psyr_0266 Psyr_0266 Psyr_0267 Psyr_0267 Psyr_0268 Psyr_0268 Psyr_0753 Psyr_0753 engB engB pncB pncB Psyr_3219 Psyr_3219 Psyr_0569 Psyr_0569 Psyr_0807 Psyr_0807
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Psyr_0265N-acetylmuramoyl-L-alanine amidase, family 2. (283 aa)    
Predicted Functional Partners:
Psyr_0266
GGDEF domain protein.
       0.734
Psyr_0267
Endonuclease/exonuclease/phosphatase.
       0.734
Psyr_0268
DSBA oxidoreductase.
       0.734
Psyr_0753
Protein of unknown function DUF187.
     0.666
engB
Cell division checkpoint GTPase YihA; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.495
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
  
     0.437
Psyr_3219
Peptidase M24.
  
    0.431
Psyr_0569
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.406
Psyr_0807
HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2.
  
     0.405
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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