STRINGSTRING
Psyr_0266 Psyr_0266 Psyr_1293 Psyr_1293 Psyr_0267 Psyr_0267 Psyr_3942 Psyr_3942 Psyr_4221 Psyr_4221 Psyr_0171 Psyr_0171 Psyr_0268 Psyr_0268 Psyr_0265 Psyr_0265 Psyr_1292 Psyr_1292 Psyr_0509 Psyr_0509 Psyr_2940 Psyr_2940
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0266GGDEF domain protein. (690 aa)    
Predicted Functional Partners:
Psyr_1293
EAL:Response regulator receiver.
 
 
 0.837
Psyr_0267
Endonuclease/exonuclease/phosphatase.
  
    0.834
Psyr_3942
Diguanylate cyclase/phosphodiesterase.
 
 
 0.826
Psyr_4221
Diguanylate cyclase/phosphodiesterase.
 
 
 0.820
Psyr_0171
EAL.
 
  
 0.801
Psyr_0268
DSBA oxidoreductase.
       0.795
Psyr_0265
N-acetylmuramoyl-L-alanine amidase, family 2.
       0.734
Psyr_1292
Multi-sensor hybrid histidine kinase.
 
 
 0.619
Psyr_0509
PAS:GGDEF.
 
 
0.580
Psyr_2940
PAS.
  
 
 0.579
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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