STRINGSTRING
Psyr_0273 Psyr_0273 Psyr_0274 Psyr_0274 Psyr_0578 Psyr_0578 Psyr_1776 Psyr_1776 Psyr_2237 Psyr_2237 Psyr_1976 Psyr_1976 Psyr_2653 Psyr_2653 Psyr_3316 Psyr_3316 Psyr_4859 Psyr_4859 Psyr_0593 Psyr_0593 Psyr_1177 Psyr_1177
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0273Integrase, catalytic region. (278 aa)    
Predicted Functional Partners:
Psyr_0274
ISPsy9, transposase OrfA.
 
  
 0.930
Psyr_0578
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer.
      
 0.760
Psyr_1776
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer.
      
 0.760
Psyr_2237
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer.
      
 0.760
Psyr_1976
ISPsy8, transposase OrfA.
 
     0.723
Psyr_2653
ISPsy8, transposase OrfA.
 
     0.723
Psyr_3316
ISPsy8, transposase OrfA.
 
     0.723
Psyr_4859
ISPsy8, transposase OrfA.
 
  
 0.722
Psyr_0593
ISPsy9, transposase OrfA.
 
  
 0.704
Psyr_1177
ISPsy9, transposase OrfA.
 
  
 0.704
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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