STRINGSTRING
Psyr_0274 Psyr_0274 Psyr_0273 Psyr_0273 Psyr_0592 Psyr_0592 Psyr_1176 Psyr_1176 Psyr_4616 Psyr_4616 Psyr_4680 Psyr_4680 Psyr_2654 Psyr_2654 Psyr_3317 Psyr_3317 Psyr_1975 Psyr_1975 Psyr_4860 Psyr_4860 Psyr_0275 Psyr_0275
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0274ISPsy9, transposase OrfA. (179 aa)    
Predicted Functional Partners:
Psyr_0273
Integrase, catalytic region.
 
  
 0.930
Psyr_0592
Integrase, catalytic region.
 
  
 0.704
Psyr_1176
Integrase, catalytic region.
 
  
 0.704
Psyr_4616
Integrase, catalytic region.
 
  
 0.704
Psyr_4680
Integrase, catalytic region.
  
     0.687
Psyr_2654
Integrase, catalytic region.
  
     0.662
Psyr_3317
Integrase, catalytic region.
  
     0.662
Psyr_1975
Integrase, catalytic region.
  
     0.661
Psyr_4860
Integrase, catalytic region.
  
     0.660
Psyr_0275
Periplasmic solute binding protein.
       0.429
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.