Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0287 | Psyr_0288 | Psyr_0287 | Psyr_0288 | Sulphate transporter. | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.981 |
Psyr_0287 | Psyr_0588 | Psyr_0287 | Psyr_0588 | Sulphate transporter. | Transglutaminase-like protein. | 0.670 |
Psyr_0287 | Psyr_0590 | Psyr_0287 | Psyr_0590 | Sulphate transporter. | Transglutaminase-like protein. | 0.670 |
Psyr_0287 | Psyr_0859 | Psyr_0287 | Psyr_0859 | Sulphate transporter. | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.767 |
Psyr_0287 | Psyr_1871 | Psyr_0287 | Psyr_1871 | Sulphate transporter. | Transglutaminase-like protein. | 0.670 |
Psyr_0287 | Psyr_2055 | Psyr_0287 | Psyr_2055 | Sulphate transporter. | Transglutaminase-like protein. | 0.670 |
Psyr_0287 | Psyr_2270 | Psyr_0287 | Psyr_2270 | Sulphate transporter. | Transferase hexapeptide repeat protein. | 0.526 |
Psyr_0287 | Psyr_3208 | Psyr_0287 | Psyr_3208 | Sulphate transporter. | NADH dehydrogenase subunit M. | 0.550 |
Psyr_0287 | Psyr_4314 | Psyr_0287 | Psyr_4314 | Sulphate transporter. | Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein. | 0.513 |
Psyr_0287 | sbcD | Psyr_0287 | Psyr_1715 | Sulphate transporter. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.513 |
Psyr_0288 | Psyr_0287 | Psyr_0288 | Psyr_0287 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Sulphate transporter. | 0.981 |
Psyr_0288 | Psyr_0859 | Psyr_0288 | Psyr_0859 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.918 |
Psyr_0288 | Psyr_2270 | Psyr_0288 | Psyr_2270 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Transferase hexapeptide repeat protein. | 0.493 |
Psyr_0588 | Psyr_0287 | Psyr_0588 | Psyr_0287 | Transglutaminase-like protein. | Sulphate transporter. | 0.670 |
Psyr_0588 | Psyr_0590 | Psyr_0588 | Psyr_0590 | Transglutaminase-like protein. | Transglutaminase-like protein. | 0.697 |
Psyr_0590 | Psyr_0287 | Psyr_0590 | Psyr_0287 | Transglutaminase-like protein. | Sulphate transporter. | 0.670 |
Psyr_0590 | Psyr_0588 | Psyr_0590 | Psyr_0588 | Transglutaminase-like protein. | Transglutaminase-like protein. | 0.697 |
Psyr_0859 | Psyr_0287 | Psyr_0859 | Psyr_0287 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Sulphate transporter. | 0.767 |
Psyr_0859 | Psyr_0288 | Psyr_0859 | Psyr_0288 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.918 |
Psyr_0859 | Psyr_2270 | Psyr_0859 | Psyr_2270 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Transferase hexapeptide repeat protein. | 0.493 |
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