STRINGSTRING
Psyr_0298 Psyr_0298 Psyr_0296 Psyr_0296 Psyr_0297 Psyr_0297 Psyr_0295 Psyr_0295 Psyr_2504 Psyr_2504 Psyr_2943 Psyr_2943 Psyr_2505 Psyr_2505 Psyr_2944 Psyr_2944 Psyr_0357 Psyr_0357 Psyr_2964 Psyr_2964 Psyr_0973 Psyr_0973
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0298Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (261 aa)    
Predicted Functional Partners:
Psyr_0296
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 0.969
Psyr_0297
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 
 0.945
Psyr_0295
Amino acid ABC transporter ATP-binding protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.928
Psyr_2504
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 
 0.698
Psyr_2943
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
  
   0.689
Psyr_2505
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 
 0.688
Psyr_2944
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 
 0.667
Psyr_0357
Diaminopimelate ABC transporter membrane protein.
 
 
 0.645
Psyr_2964
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 
 0.620
Psyr_0973
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
 
 0.610
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (24%) [HD]