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Psyr_0345 Psyr_0345 Psyr_0346 Psyr_0346 Psyr_3132 Psyr_3132 Psyr_2194 Psyr_2194 Psyr_0344 Psyr_0344 macB1 macB1 macB2 macB2 Psyr_2282 Psyr_2282 Psyr_2968 Psyr_2968 Psyr_4803 Psyr_4803 Psyr_2865 Psyr_2865
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0345Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (361 aa)    
Predicted Functional Partners:
Psyr_0346
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.972
Psyr_3132
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.882
Psyr_2194
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.876
Psyr_0344
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
0.839
macB1
ABC transporter:Protein of unknown function DUF214; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.790
macB2
ABC transporter:Protein of unknown function DUF214; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.790
Psyr_2282
Hydrophobe/amphiphile efflux-1 HAE1.
 
 
 0.673
Psyr_2968
Hydrophobe/amphiphile efflux-1 HAE1.
 
 
 0.662
Psyr_4803
Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.649
Psyr_2865
Hydrophobe/amphiphile efflux-1 HAE1.
 
 
 0.632
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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