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Psyr_0448 Psyr_0448 Psyr_0445 Psyr_0445 Psyr_0446 Psyr_0446 Psyr_1794 Psyr_1794 mdcG mdcG mdcC mdcC mdcB mdcB Psyr_0442 Psyr_0442 Psyr_4313 Psyr_4313 Psyr_4314 Psyr_4314 Psyr_4312 Psyr_4312
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
Psyr_0448Acyl transferase region. (311 aa)    
Predicted Functional Partners:
Psyr_0445
Malonate decarboxylase, beta subunit.
 
  
 0.967
Psyr_0446
Malonate decarboxylase gamma subunit.
 
  
 0.964
Psyr_1794
Amino acid adenylation.
  
 0.964
mdcG
Malonate decarboxylase subunit, putative; Transfers 2'-(5-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-[acyl-carrier-protein] of the malonate decarboxylase to yield holo-[acyl-carrier-protein]; Belongs to the MdcG family.
 
  
 0.956
mdcC
Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
  
 0.951
mdcB
Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
    0.948
Psyr_0442
Malonate decarboxylase, alpha subunit.
 
  
 0.945
Psyr_4313
Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein.
 0.934
Psyr_4314
Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein.
 
 0.932
Psyr_4312
Erythronolide synthase.
 
 0.915
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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