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Psyr_0470 Psyr_0470 Psyr_0471 Psyr_0471 Psyr_0472 Psyr_0472 Psyr_0932 Psyr_0932 Psyr_0473 Psyr_0473 Psyr_3394 Psyr_3394 metXS metXS Psyr_4872 Psyr_4872 Psyr_2496 Psyr_2496 Psyr_0687 Psyr_0687 Psyr_0931 Psyr_0931
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0470Conserved hypothetical protein. (107 aa)    
Predicted Functional Partners:
Psyr_0471
Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.834
Psyr_0472
Ham1-like protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.795
Psyr_0932
Conserved hypothetical protein.
  
     0.707
Psyr_0473
Methionine biosynthesis MetW.
       0.700
Psyr_3394
Conserved hypothetical protein.
  
     0.700
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the AB hydrolase superfamily. MetX family.
       0.697
Psyr_4872
Conserved hypothetical protein.
  
     0.684
Psyr_2496
Lipopolysaccharide core biosynthesis domain protein.
  
     0.663
Psyr_0687
Conserved hypothetical protein.
  
     0.646
Psyr_0931
Hemolysin-type calcium-binding region.
  
     0.639
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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