STRINGSTRING
Psyr_0489 Psyr_0489 Psyr_0490 Psyr_0490 Psyr_0491 Psyr_0491 Psyr_0493 Psyr_0493 Psyr_0492 Psyr_0492 Psyr_1292 Psyr_1292 Psyr_0488 Psyr_0488 Psyr_2940 Psyr_2940 Psyr_3653 Psyr_3653 Psyr_0723 Psyr_0723 Psyr_3085 Psyr_3085
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0489Response regulator receiver. (121 aa)    
Predicted Functional Partners:
Psyr_0490
CheW-like protein.
 
 
 0.991
Psyr_0491
Chemotaxis sensory transducer.
 
 0.991
Psyr_0493
CheW-like protein.
 
 
  0.979
Psyr_0492
Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt.
 
0.969
Psyr_1292
Multi-sensor hybrid histidine kinase.
 
 0.889
Psyr_0488
Response regulator receiver.
 
  
0.862
Psyr_2940
PAS.
 
0.844
Psyr_3653
GGDEF domain protein.
 
 
  
 0.832
Psyr_0723
Sensor protein PilS.
 
 
 0.829
Psyr_3085
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal.
 
 
 0.792
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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