Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Psyr_0490 | Psyr_0491 | CheW-like protein. | Chemotaxis sensory transducer. | 0.988 |
| Psyr_0490 | Psyr_0492 | CheW-like protein. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | 0.995 |
| Psyr_0490 | Psyr_0493 | CheW-like protein. | CheW-like protein. | 0.973 |
| Psyr_0490 | Psyr_0886 | CheW-like protein. | Response regulator receiver. | 0.653 |
| Psyr_0490 | Psyr_1139 | CheW-like protein. | Response regulator receiver:CheW-like protein. | 0.446 |
| Psyr_0490 | Psyr_2445 | CheW-like protein. | Multi-sensor hybrid histidine kinase. | 0.773 |
| Psyr_0490 | Psyr_2450 | CheW-like protein. | PAS. | 0.711 |
| Psyr_0490 | Psyr_3297 | CheW-like protein. | CheW protein. | 0.504 |
| Psyr_0490 | Psyr_3435 | CheW-like protein. | Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.503 |
| Psyr_0490 | Psyr_3486 | CheW-like protein. | Response regulator receiver:CheW-like protein. | 0.502 |
| Psyr_0491 | Psyr_0490 | Chemotaxis sensory transducer. | CheW-like protein. | 0.988 |
| Psyr_0491 | Psyr_0492 | Chemotaxis sensory transducer. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | 0.993 |
| Psyr_0491 | Psyr_0493 | Chemotaxis sensory transducer. | CheW-like protein. | 0.987 |
| Psyr_0491 | Psyr_1139 | Chemotaxis sensory transducer. | Response regulator receiver:CheW-like protein. | 0.609 |
| Psyr_0491 | Psyr_2445 | Chemotaxis sensory transducer. | Multi-sensor hybrid histidine kinase. | 0.655 |
| Psyr_0491 | Psyr_2450 | Chemotaxis sensory transducer. | PAS. | 0.462 |
| Psyr_0491 | Psyr_3297 | Chemotaxis sensory transducer. | CheW protein. | 0.624 |
| Psyr_0491 | Psyr_3486 | Chemotaxis sensory transducer. | Response regulator receiver:CheW-like protein. | 0.613 |
| Psyr_0492 | Psyr_0490 | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | CheW-like protein. | 0.995 |
| Psyr_0492 | Psyr_0491 | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | Chemotaxis sensory transducer. | 0.993 |
page 1 of 6