Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyr_0187 | Psyr_0286 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
Psyr_0187 | Psyr_0491 | Conserved hypothetical protein. | Chemotaxis sensory transducer. | 0.516 |
Psyr_0187 | Psyr_0492 | Conserved hypothetical protein. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | 0.492 |
Psyr_0187 | Psyr_0493 | Conserved hypothetical protein. | CheW-like protein. | 0.756 |
Psyr_0187 | Psyr_0972 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.766 |
Psyr_0286 | Psyr_0187 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
Psyr_0286 | Psyr_0491 | Conserved hypothetical protein. | Chemotaxis sensory transducer. | 0.538 |
Psyr_0286 | Psyr_0492 | Conserved hypothetical protein. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | 0.542 |
Psyr_0286 | Psyr_0493 | Conserved hypothetical protein. | CheW-like protein. | 0.762 |
Psyr_0286 | Psyr_0972 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
Psyr_0488 | Psyr_0489 | Response regulator receiver. | Response regulator receiver. | 0.862 |
Psyr_0488 | Psyr_0490 | Response regulator receiver. | CheW-like protein. | 0.991 |
Psyr_0488 | Psyr_0491 | Response regulator receiver. | Chemotaxis sensory transducer. | 0.990 |
Psyr_0488 | Psyr_0492 | Response regulator receiver. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | 0.963 |
Psyr_0488 | Psyr_0493 | Response regulator receiver. | CheW-like protein. | 0.980 |
Psyr_0488 | Psyr_2445 | Response regulator receiver. | Multi-sensor hybrid histidine kinase. | 0.712 |
Psyr_0489 | Psyr_0488 | Response regulator receiver. | Response regulator receiver. | 0.862 |
Psyr_0489 | Psyr_0490 | Response regulator receiver. | CheW-like protein. | 0.991 |
Psyr_0489 | Psyr_0491 | Response regulator receiver. | Chemotaxis sensory transducer. | 0.991 |
Psyr_0489 | Psyr_0492 | Response regulator receiver. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt. | 0.969 |
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