Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0507 | PutA | Psyr_0507 | Psyr_0506 | Na+/solute symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.965 |
Psyr_0832 | Psyr_1585 | Psyr_0832 | Psyr_1585 | Two-component sensor kinase CbrA. | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | 0.767 |
Psyr_0832 | PutA | Psyr_0832 | Psyr_0506 | Two-component sensor kinase CbrA. | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.966 |
Psyr_1585 | Psyr_0832 | Psyr_1585 | Psyr_0832 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | Two-component sensor kinase CbrA. | 0.767 |
Psyr_1585 | PutA | Psyr_1585 | Psyr_0506 | Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal. | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.968 |
Psyr_2273 | Psyr_3492 | Psyr_2273 | Psyr_3492 | L-glutamine synthetase. | L-glutamine synthetase. | 0.720 |
Psyr_2273 | Psyr_4817 | Psyr_2273 | Psyr_4817 | L-glutamine synthetase. | L-glutamine synthetase. | 0.687 |
Psyr_2273 | PutA | Psyr_2273 | Psyr_0506 | L-glutamine synthetase. | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.939 |
Psyr_2273 | proA | Psyr_2273 | Psyr_4369 | L-glutamine synthetase. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.817 |
Psyr_3052 | PutA | Psyr_3052 | Psyr_0506 | Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.965 |
Psyr_3492 | Psyr_2273 | Psyr_3492 | Psyr_2273 | L-glutamine synthetase. | L-glutamine synthetase. | 0.720 |
Psyr_3492 | Psyr_4817 | Psyr_3492 | Psyr_4817 | L-glutamine synthetase. | L-glutamine synthetase. | 0.716 |
Psyr_3492 | PutA | Psyr_3492 | Psyr_0506 | L-glutamine synthetase. | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.939 |
Psyr_3492 | proA | Psyr_3492 | Psyr_4369 | L-glutamine synthetase. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.817 |
Psyr_4817 | Psyr_2273 | Psyr_4817 | Psyr_2273 | L-glutamine synthetase. | L-glutamine synthetase. | 0.687 |
Psyr_4817 | Psyr_3492 | Psyr_4817 | Psyr_3492 | L-glutamine synthetase. | L-glutamine synthetase. | 0.716 |
Psyr_4817 | PutA | Psyr_4817 | Psyr_0506 | L-glutamine synthetase. | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.939 |
Psyr_4817 | proA | Psyr_4817 | Psyr_4369 | L-glutamine synthetase. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.817 |
PutA | Psyr_0507 | Psyr_0506 | Psyr_0507 | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Na+/solute symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.965 |
PutA | Psyr_0832 | Psyr_0506 | Psyr_0832 | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Two-component sensor kinase CbrA. | 0.966 |
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