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Psyr_0513 Psyr_0513 Psyr_1997 Psyr_1997 Psyr_4891 Psyr_4891 Psyr_1824 Psyr_1824 Psyr_2463 Psyr_2463 Psyr_1833 Psyr_1833 Psyr_1296 Psyr_1296 astE astE Psyr_0512 Psyr_0512 Psyr_4762 Psyr_4762
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0513Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (251 aa)    
Predicted Functional Partners:
Psyr_1997
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
  
     0.682
Psyr_4891
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
  
     0.636
Psyr_1824
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
  
     0.569
Psyr_2463
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
  
     0.564
Psyr_1833
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
  
     0.557
Psyr_1296
Conserved hypothetical protein.
  
     0.540
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
  
     0.485
Psyr_0512
GCN5-related N-acetyltransferase.
       0.474
Psyr_4762
Conserved hypothetical protein.
  
     0.403
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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