STRINGSTRING
Psyr_0514 Psyr_0514 Psyr_4019 Psyr_4019 Psyr_2971 Psyr_2971 Psyr_0128 Psyr_0128 Psyr_4386 Psyr_4386 NdpA NdpA Psyr_0515 Psyr_0515 sprT sprT Psyr_0501 Psyr_0501 Psyr_2852 Psyr_2852 Psyr_1238 Psyr_1238
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0514Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK. (732 aa)    
Predicted Functional Partners:
Psyr_4019
H-NS family protein MvaT.
  
     0.591
Psyr_2971
H-NS family protein MvaT.
  
     0.584
Psyr_0128
H-NS family protein MvaT.
  
     0.578
Psyr_4386
Conserved hypothetical protein.
  
     0.576
NdpA
37kDa nucleoid-associated bacterial protein.
  
     0.558
Psyr_0515
HI0933-like protein.
       0.537
sprT
Protein of unknown function DUF335; Belongs to the SprT family.
  
     0.524
Psyr_0501
MscS Mechanosensitive ion channel.
 
     0.514
Psyr_2852
Conserved hypothetical protein.
  
     0.488
Psyr_1238
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.485
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.