STRINGSTRING
Psyr_0520 Psyr_0520 Psyr_0521 Psyr_0521 Psyr_0522 Psyr_0522 Psyr_0523 Psyr_0523 Psyr_0542 Psyr_0542 nuoC nuoC Psyr_0525 Psyr_0525 Psyr_0526 Psyr_0526 Psyr_0010 Psyr_0010 hldE hldE Psyr_0524 Psyr_0524
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
Psyr_0520Glycosyl transferase, family 9. (344 aa)    
Predicted Functional Partners:
Psyr_0521
Glycosyl transferase, family 9.
 
0.996
Psyr_0522
Glycosyl transferase, group 1.
 
 
 0.990
Psyr_0523
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.988
Psyr_0542
Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
  
 0.956
nuoC
NADH dehydrogenase subunit D / NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
    
 
 0.933
Psyr_0525
Lipopolysaccharide kinase.
 
 
 0.906
Psyr_0526
Conserved hypothetical protein.
 
 
 
 0.902
Psyr_0010
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase.
   
 0.871
hldE
D-alpha,beta-D-heptose 7-phosphate 1-kinase / D-beta-D-heptose 1-phosphate adenylyltransferase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family.
 
  
 0.850
Psyr_0524
Lipopolysaccharide kinase.
 
     0.835
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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