STRINGSTRING
Psyr_0526 Psyr_0526 Psyr_0522 Psyr_0522 Psyr_0523 Psyr_0523 Psyr_0525 Psyr_0525 Psyr_0524 Psyr_0524 Psyr_0521 Psyr_0521 Psyr_0520 Psyr_0520 nuoC nuoC Psyr_4067 Psyr_4067 Psyr_0528 Psyr_0528 Psyr_4849 Psyr_4849
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0526Conserved hypothetical protein. (481 aa)    
Predicted Functional Partners:
Psyr_0522
Glycosyl transferase, group 1.
 
 
 0.958
Psyr_0523
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.957
Psyr_0525
Lipopolysaccharide kinase.
 
   
 0.952
Psyr_0524
Lipopolysaccharide kinase.
 
     0.951
Psyr_0521
Glycosyl transferase, family 9.
 
 
 
 0.923
Psyr_0520
Glycosyl transferase, family 9.
 
 
 
 0.902
nuoC
NADH dehydrogenase subunit D / NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
    
 0.878
Psyr_4067
Lipopolysaccharide kinase.
 
     0.787
Psyr_0528
Carbamoyltransferase.
 
   
 0.785
Psyr_4849
SdiA-regulated.
 
     0.767
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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