STRINGSTRING
Psyr_0528 Psyr_0528 Psyr_0529 Psyr_0529 Psyr_0531 Psyr_0531 Psyr_0530 Psyr_0530 Psyr_0526 Psyr_0526 Psyr_0523 Psyr_0523 Psyr_0522 Psyr_0522 Psyr_0525 Psyr_0525 Psyr_0532 Psyr_0532 Psyr_0524 Psyr_0524 Psyr_4067 Psyr_4067
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0528Carbamoyltransferase. (585 aa)    
Predicted Functional Partners:
Psyr_0529
Glycosyl transferase, group 1.
 
  
 0.906
Psyr_0531
LmbE-like protein.
 
   
 0.836
Psyr_0530
Mig-14.
     
 0.811
Psyr_0526
Conserved hypothetical protein.
 
   
 0.785
Psyr_0523
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
  
 0.777
Psyr_0522
Glycosyl transferase, group 1.
 
   
 0.772
Psyr_0525
Lipopolysaccharide kinase.
 
   
 0.767
Psyr_0532
Conserved hypothetical protein.
     
 0.736
Psyr_0524
Lipopolysaccharide kinase.
 
   
 0.723
Psyr_4067
Lipopolysaccharide kinase.
 
     0.715
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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