STRINGSTRING
Psyr_0611 Psyr_0611 Psyr_0610 Psyr_0610 Psyr_0917 Psyr_0917 Psyr_0918 Psyr_0918 Psyr_3469 Psyr_3469 Psyr_0919 Psyr_0919 Psyr_0929 Psyr_0929 Psyr_0920 Psyr_0920 Psyr_0612 Psyr_0612 Psyr_0615 Psyr_0615 Psyr_0616 Psyr_0616
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0611ABC transporter. (234 aa)    
Predicted Functional Partners:
Psyr_0610
ABC-2.
 
 0.998
Psyr_0917
ABC-2.
 
 0.992
Psyr_0918
ABC transporter.
  
  
 
0.911
Psyr_3469
Glycosyl transferase, family 2.
 
 
 0.780
Psyr_0919
Chromosome segregation ATPase-like protein.
 
   
 0.653
Psyr_0929
Glycosyl transferase, family 2.
 
  
 0.642
Psyr_0920
Glycosyl transferase, group 1.
 
 
 0.634
Psyr_0612
Nucleotidyl transferase.
     
 0.616
Psyr_0615
Conserved hypothetical protein.
     
 0.616
Psyr_0616
Conserved domain protein.
       0.598
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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