STRINGSTRING
Psyr_0614 Psyr_0614 Psyr_0613 Psyr_0613 Psyr_0615 Psyr_0615 Psyr_0612 Psyr_0612 Psyr_0616 Psyr_0616 Psyr_0617 Psyr_0617 Psyr_0618 Psyr_0618 Psyr_1854 Psyr_1854 Psyr_0619 Psyr_0619 Psyr_0610 Psyr_0610 Psyr_0611 Psyr_0611
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0614HAD-superfamily hydrolase, subfamily IA, variant 3. (212 aa)    
Predicted Functional Partners:
Psyr_0613
Conserved hypothetical protein.
 
   
 0.940
Psyr_0615
Conserved hypothetical protein.
 
    0.937
Psyr_0612
Nucleotidyl transferase.
 
    0.921
Psyr_0616
Conserved domain protein.
       0.795
Psyr_0617
Conserved hypothetical protein.
       0.779
Psyr_0618
Conserved hypothetical protein.
       0.776
Psyr_1854
Major facilitator superfamily.
  
  
 0.631
Psyr_0619
WavE lipopolysaccharide synthesis.
       0.621
Psyr_0610
ABC-2.
       0.588
Psyr_0611
ABC transporter.
       0.588
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.