STRINGSTRING
Psyr_0623 Psyr_0623 Psyr_1532 Psyr_1532 Psyr_0560 Psyr_0560 Psyr_4592 Psyr_4592 ppa ppa Psyr_0683 Psyr_0683 Psyr_2511 Psyr_2511 Psyr_1327 Psyr_1327 Psyr_1948 Psyr_1948 Psyr_1105 Psyr_1105 Psyr_0855 Psyr_0855
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0623Peptidase S24, S26A and S26B. (243 aa)    
Predicted Functional Partners:
Psyr_1532
Hypothetical protein.
  
     0.520
Psyr_0560
Conserved hypothetical protein.
  
     0.496
Psyr_4592
Phage tail tape measure protein TP901, core region.
  
    0.490
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.446
Psyr_0683
NUDIX hydrolase.
  
     0.445
Psyr_2511
UvrD/REP helicase.
  
     0.428
Psyr_1327
Conserved hypothetical protein.
  
     0.420
Psyr_1948
ABC transporter, periplasmic substrate-binding protein, putative.
  
     0.411
Psyr_1105
TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor.
  
   
 0.410
Psyr_0855
Conserved hypothetical protein.
  
     0.403
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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